HCSGD entry for HIST1H2AJ
1. General information
| Official gene symbol | HIST1H2AJ |
|---|---|
| Entrez ID | 8331 |
| Gene full name | histone cluster 1, H2aj |
| Other gene symbols | H2A/E H2AFE dJ160A22.4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IEA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0584013867 | 0.0335381938 | 0.5239205521 | 0.3457772033 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1675454365 |
| GSE13712_SHEAR | Up | 0.9558448268 |
| GSE13712_STATIC | Up | 0.4452992609 |
| GSE19018 | Up | 0.5650201592 |
| GSE19899_A1 | Up | 0.2409546357 |
| GSE19899_A2 | Up | 0.7890652141 |
| PubMed_21979375_A1 | Up | 0.5625406841 |
| PubMed_21979375_A2 | Up | 0.0037148917 |
| GSE35957 | Up | 0.0843327490 |
| GSE36640 | Down | -3.4103921118 |
| GSE54402 | Down | -0.5130168657 |
| GSE9593 | Up | 0.2447000785 |
| GSE43922 | Down | -1.6273198750 |
| GSE24585 | Down | -0.5626499099 |
| GSE37065 | Down | -0.1450909790 |
| GSE28863_A1 | Down | -0.1363480101 |
| GSE28863_A2 | Up | 0.6600860340 |
| GSE28863_A3 | Down | -0.2879454381 |
| GSE28863_A4 | Down | -0.4338580859 |
| GSE48662 | Down | -0.0883240382 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025519 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-92b-5p | MIMAT0004792 | MIRT037794 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041250 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042930 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051259 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
