HCSGD entry for TMPRSS13
1. General information
| Official gene symbol | TMPRSS13 |
|---|---|
| Entrez ID | 84000 |
| Gene full name | transmembrane protease, serine 13 |
| Other gene symbols | MSP MSPL MSPS TMPRSS11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004252 | Serine-type endopeptidase activity | IEA NAS | molecular_function |
| GO:0005044 | Scavenger receptor activity | IEA | molecular_function |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | NAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6624819498 | 0.8726755062 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1110521612 |
| GSE13712_SHEAR | Down | -0.1198854389 |
| GSE13712_STATIC | Up | 0.0450203059 |
| GSE19018 | Up | 0.0751486514 |
| GSE19899_A1 | Down | -0.0666654987 |
| GSE19899_A2 | Up | 0.2374686910 |
| PubMed_21979375_A1 | Up | 0.1499977841 |
| PubMed_21979375_A2 | Down | -0.0991818110 |
| GSE35957 | Up | 0.1060206942 |
| GSE36640 | Up | 0.0890747257 |
| GSE54402 | Down | -0.0350859828 |
| GSE9593 | Up | 0.0474939813 |
| GSE43922 | Up | 0.0144841640 |
| GSE24585 | Up | 0.2385988485 |
| GSE37065 | Up | 0.1279489188 |
| GSE28863_A1 | Down | -0.0401022072 |
| GSE28863_A2 | Down | -0.0876686877 |
| GSE28863_A3 | Up | 0.2111871387 |
| GSE28863_A4 | Up | 0.0252137577 |
| GSE48662 | Up | 0.0856453463 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016945 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
