HCSGD entry for SPARCL1

1. General information

Official gene symbolSPARCL1
Entrez ID8404
Gene full nameSPARC-like 1 (hevin)
Other gene symbolsPIG33 SC1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005578Proteinaceous extracellular matrixIEAcellular_component
GO:0005615Extracellular spaceIEAcellular_component
GO:0007165Signal transductionIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.29046021810.92817011890.98960256281.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.8489232240
GSE13712_SHEARDown-0.0369628432
GSE13712_STATICDown-0.0212767828
GSE19018Up0.1785725347
GSE19899_A1Up0.1148615372
GSE19899_A2Down-0.1881724111
PubMed_21979375_A1Up0.1973975856
PubMed_21979375_A2Up0.0107735573
GSE35957Up0.0112369956
GSE36640Up0.2170489532
GSE54402Up0.1063288087
GSE9593Up0.0076115679
GSE43922Up0.0069805863
GSE24585Up0.1501077905
GSE37065Down-0.0537426170
GSE28863_A1Down-0.0613221772
GSE28863_A2Up0.0680734533
GSE28863_A3Up0.1854993803
GSE28863_A4Up0.0125081587
GSE48662Up0.0483608769

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-98-5pMIMAT0000096MIRT027605MicroarrayFunctional MTI (Weak)19088304
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.