HCSGD entry for HPS3
1. General information
| Official gene symbol | HPS3 |
|---|---|
| Entrez ID | 84343 |
| Gene full name | Hermansky-Pudlak syndrome 3 |
| Other gene symbols | SUTAL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006996 | Organelle organization | IEA | biological_process |
| GO:0031084 | BLOC-2 complex | IPI | cellular_component |
| GO:0043473 | Pigmentation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8476905057 | 0.0364791421 | 0.9999902473 | 0.3601528507 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0778790254 |
| GSE13712_SHEAR | Down | -0.0022486835 |
| GSE13712_STATIC | Down | -0.0836068558 |
| GSE19018 | Up | 0.2478680785 |
| GSE19899_A1 | Down | -0.2391530784 |
| GSE19899_A2 | Down | -0.5982973196 |
| PubMed_21979375_A1 | Down | -0.1917383748 |
| PubMed_21979375_A2 | Down | -1.1797706282 |
| GSE35957 | Down | -0.1446760702 |
| GSE36640 | Down | -1.1589123084 |
| GSE54402 | Down | -0.1350610986 |
| GSE9593 | Up | 0.0061302890 |
| GSE43922 | Down | -0.1955586325 |
| GSE24585 | Down | -0.1005232308 |
| GSE37065 | Up | 0.3824370913 |
| GSE28863_A1 | Up | 0.1230555005 |
| GSE28863_A2 | Up | 0.8070951638 |
| GSE28863_A3 | Down | -0.5106644888 |
| GSE28863_A4 | Down | -0.2679619414 |
| GSE48662 | Down | -0.6844966020 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-636 | MIMAT0003306 | MIRT039577 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
