HCSGD entry for FNDC1
1. General information
| Official gene symbol | FNDC1 |
|---|---|
| Entrez ID | 84624 |
| Gene full name | fibronectin type III domain containing 1 |
| Other gene symbols | AGS8 FNDC2 MEL4B3 RP11-243O10.2 bA243O10.1 dJ322A24.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001934 | Positive regulation of protein phosphorylation | IEA | biological_process |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0005911 | Cell-cell junction | IEA | cellular_component |
| GO:0010666 | Positive regulation of cardiac muscle cell apoptotic process | IEA | biological_process |
| GO:0031966 | Mitochondrial membrane | IEA | cellular_component |
| GO:0051223 | Regulation of protein transport | IEA | biological_process |
| GO:0071456 | Cellular response to hypoxia | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2157377113 | 0.0068940732 | 0.8941770430 | 0.1653088342 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -2.4607219670 |
| GSE13712_SHEAR | Up | 0.0207887443 |
| GSE13712_STATIC | Down | -0.0168763866 |
| GSE19018 | Down | -1.4766819086 |
| GSE19899_A1 | Up | 0.1553012346 |
| GSE19899_A2 | Down | -0.2250320417 |
| PubMed_21979375_A1 | Down | -0.3550272437 |
| PubMed_21979375_A2 | Down | -0.4948597500 |
| GSE35957 | Up | 1.8685642857 |
| GSE36640 | Down | -0.7635950087 |
| GSE54402 | Down | -0.5049679525 |
| GSE9593 | Down | -3.5498980406 |
| GSE43922 | Up | 0.0108841463 |
| GSE24585 | Up | 0.2023282882 |
| GSE37065 | Up | 0.1575962966 |
| GSE28863_A1 | Up | 0.1235179680 |
| GSE28863_A2 | Up | 0.3518273614 |
| GSE28863_A3 | Up | 0.8327776349 |
| GSE28863_A4 | Down | -0.3580574978 |
| GSE48662 | Up | 0.4557494064 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017697 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
