HCSGD entry for ALKBH6
1. General information
| Official gene symbol | ALKBH6 |
|---|---|
| Entrez ID | 84964 |
| Gene full name | alkB, alkylation repair homolog 6 (E. coli) |
| Other gene symbols | ABH6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0016706 | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | IEA | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0393149006 | 0.9542181072 | 0.4466468333 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6146758476 |
| GSE13712_SHEAR | Down | -0.0875688623 |
| GSE13712_STATIC | Down | -0.0756333591 |
| GSE19018 | Up | 0.2462751892 |
| GSE19899_A1 | Down | -0.0414369974 |
| GSE19899_A2 | Up | 1.1211112071 |
| PubMed_21979375_A1 | Up | 0.2339271875 |
| PubMed_21979375_A2 | Down | -0.0797271724 |
| GSE35957 | Up | 0.2513729914 |
| GSE36640 | Up | 0.6580458188 |
| GSE54402 | Up | 0.3623875647 |
| GSE9593 | Up | 0.3328213591 |
| GSE43922 | Up | 0.0147796312 |
| GSE24585 | Up | 0.3597800934 |
| GSE37065 | Up | 0.0980444748 |
| GSE28863_A1 | Down | -0.1629762678 |
| GSE28863_A2 | Down | -0.0199686736 |
| GSE28863_A3 | Down | -0.1197549708 |
| GSE28863_A4 | Up | 0.1751812013 |
| GSE48662 | Up | 0.1294751057 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-320a | MIMAT0000510 | MIRT044584 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
