HCSGD entry for LSM10
1. General information
| Official gene symbol | LSM10 |
|---|---|
| Entrez ID | 84967 |
| Gene full name | LSM10, U7 small nuclear RNA associated |
| Other gene symbols | MST074 MSTP074 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000084 | Mitotic S phase | IMP | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005683 | U7 snRNP | IDA | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0006369 | Termination of RNA polymerase II transcription | TAS | biological_process |
| GO:0008334 | Histone mRNA metabolic process | TAS | biological_process |
| GO:0008380 | RNA splicing | IEA | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0015030 | Cajal body | IDA | cellular_component |
| GO:0031124 | MRNA 3'-end processing | TAS | biological_process |
| GO:0071208 | Histone pre-mRNA DCP binding | ISS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0168922951 | 0.8476653509 | 0.3208186869 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.2988370917 |
| GSE13712_SHEAR | Up | 0.0393069053 |
| GSE13712_STATIC | Up | 0.2877173547 |
| GSE19018 | Up | 0.0464879244 |
| GSE19899_A1 | Up | 0.7973911757 |
| GSE19899_A2 | Up | 0.5405571007 |
| PubMed_21979375_A1 | Up | 1.2220959045 |
| PubMed_21979375_A2 | Up | 0.4799788495 |
| GSE35957 | Down | -0.3130864876 |
| GSE36640 | Up | 0.6330554275 |
| GSE54402 | Up | 0.4337918615 |
| GSE9593 | Up | 0.2480401515 |
| GSE43922 | Up | 0.3040760760 |
| GSE24585 | Down | -0.3793070076 |
| GSE37065 | Up | 0.0103758184 |
| GSE28863_A1 | Down | -0.2280659014 |
| GSE28863_A2 | Up | 0.0703960370 |
| GSE28863_A3 | Down | -0.2961161169 |
| GSE28863_A4 | Down | -0.1912537268 |
| GSE48662 | Up | 0.0678361430 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022146 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031396 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
