HCSGD entry for ITGA10
1. General information
| Official gene symbol | ITGA10 |
|---|---|
| Entrez ID | 8515 |
| Gene full name | integrin, alpha 10 |
| Other gene symbols | PRO827 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005518 | Collagen binding | TAS | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0007160 | Cell-matrix adhesion | TAS | biological_process |
| GO:0007229 | Integrin-mediated signaling pathway | IEA | biological_process |
| GO:0008305 | Integrin complex | IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9003452566 | 0.0049363968 | 0.9999902473 | 0.1427812088 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0125799566 |
| GSE13712_SHEAR | Down | -2.9385637837 |
| GSE13712_STATIC | Down | -2.0339692710 |
| GSE19018 | Up | 0.0477145018 |
| GSE19899_A1 | Down | -0.0647120319 |
| GSE19899_A2 | Down | -0.2851292603 |
| PubMed_21979375_A1 | Down | -1.9481825898 |
| PubMed_21979375_A2 | Down | -0.3548132937 |
| GSE35957 | Down | -1.7723468893 |
| GSE36640 | Up | 0.4237200406 |
| GSE54402 | Up | 0.2984816851 |
| GSE9593 | Up | 0.0687912312 |
| GSE43922 | Down | -0.0552315637 |
| GSE24585 | Down | -0.0696841150 |
| GSE37065 | Up | 0.1778645550 |
| GSE28863_A1 | Down | -0.5270049465 |
| GSE28863_A2 | Up | 0.5086753565 |
| GSE28863_A3 | Up | 0.1609010134 |
| GSE28863_A4 | Up | 0.0399592881 |
| GSE48662 | Down | -0.9215289326 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017655 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-let-7c-5p | MIMAT0000064 | MIRT051770 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
