HCSGD entry for BSN
1. General information
| Official gene symbol | BSN |
|---|---|
| Entrez ID | 8927 |
| Gene full name | bassoon presynaptic cytomatrix protein |
| Other gene symbols | ZNF231 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0007268 | Synaptic transmission | TAS | biological_process |
| GO:0015630 | Microtubule cytoskeleton | IDA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030425 | Dendrite | ISS | cellular_component |
| GO:0044306 | Neuron projection terminus | IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0048786 | Presynaptic active zone | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3883444588 | 0.9445730519 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0265336119 |
| GSE13712_SHEAR | Up | 0.0902129366 |
| GSE13712_STATIC | Down | -0.0415831305 |
| GSE19018 | Up | 0.0406655567 |
| GSE19899_A1 | Up | 0.0466244046 |
| GSE19899_A2 | Up | 0.1521692164 |
| PubMed_21979375_A1 | Up | 0.0288844144 |
| PubMed_21979375_A2 | Down | -0.0108876937 |
| GSE35957 | Up | 0.2087748206 |
| GSE36640 | Up | 0.1904881098 |
| GSE54402 | Down | -0.1254064073 |
| GSE9593 | Up | 0.0668824085 |
| GSE43922 | Up | 0.1168081033 |
| GSE24585 | Up | 0.0807165409 |
| GSE37065 | Up | 0.0549814769 |
| GSE28863_A1 | Up | 0.0167799676 |
| GSE28863_A2 | Up | 0.0935994299 |
| GSE28863_A3 | Up | 0.2817528078 |
| GSE28863_A4 | Up | 0.1408003380 |
| GSE48662 | Down | -0.0714202893 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016702 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-375 | MIMAT0000728 | MIRT019679 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040863 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
