HCSGD entry for WASF1
1. General information
| Official gene symbol | WASF1 |
|---|---|
| Entrez ID | 8936 |
| Gene full name | WAS protein family, member 1 |
| Other gene symbols | SCAR1 WAVE WAVE1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005741 | Mitochondrial outer membrane | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA TAS | cellular_component |
| GO:0006461 | Protein complex assembly | NAS | biological_process |
| GO:0006928 | Cellular component movement | TAS | biological_process |
| GO:0015629 | Actin cytoskeleton | TAS | cellular_component |
| GO:0030027 | Lamellipodium | IEA | cellular_component |
| GO:0030036 | Actin cytoskeleton organization | IEA | biological_process |
| GO:0030041 | Actin filament polymerization | TAS | biological_process |
| GO:0072673 | Lamellipodium morphogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9674606968 | 0.0201197789 | 0.9999902473 | 0.2750905132 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.5482539523 |
| GSE13712_SHEAR | Up | 0.1440717791 |
| GSE13712_STATIC | Down | -0.1276421140 |
| GSE19018 | Down | -0.2863930412 |
| GSE19899_A1 | Down | -0.4956390585 |
| GSE19899_A2 | Down | -0.2388950488 |
| PubMed_21979375_A1 | Down | -0.2038743076 |
| PubMed_21979375_A2 | Down | -0.2133397130 |
| GSE35957 | Up | 0.1619627464 |
| GSE36640 | Down | -1.0049116716 |
| GSE54402 | Down | -0.3090183161 |
| GSE9593 | Up | 0.0036517768 |
| GSE43922 | Down | -0.3624731169 |
| GSE24585 | Up | 0.3110769734 |
| GSE37065 | Down | -0.2908686773 |
| GSE28863_A1 | Up | 0.1708622388 |
| GSE28863_A2 | Down | -0.2219635422 |
| GSE28863_A3 | Down | -0.3868187186 |
| GSE28863_A4 | Down | -0.3412549422 |
| GSE48662 | Up | 0.2862012205 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT023340 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052008 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
