HCSGD entry for TPGS1
1. General information
| Official gene symbol | TPGS1 |
|---|---|
| Entrez ID | 91978 |
| Gene full name | tubulin polyglutamylase complex subunit 1 |
| Other gene symbols | C19orf20 GTRGEO22 PGs1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
| GO:0005929 | Cilium | IEA | cellular_component |
| GO:0007268 | Synaptic transmission | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007288 | Sperm axoneme assembly | IEA | biological_process |
| GO:0008017 | Microtubule binding | IEA | molecular_function |
| GO:0018095 | Protein polyglutamylation | IEA | biological_process |
| GO:0030424 | Axon | IEA | cellular_component |
| GO:0030425 | Dendrite | IEA | cellular_component |
| GO:0030534 | Adult behavior | IEA | biological_process |
| GO:0051648 | Vesicle localization | IEA | biological_process |
| GO:0070740 | Tubulin-glutamic acid ligase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1563093955 | 0.8472135595 | 0.7851564122 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0845414379 |
| GSE13712_SHEAR | Down | -0.3834122741 |
| GSE13712_STATIC | Down | -0.2401811340 |
| GSE19018 | Up | 0.1405677615 |
| GSE19899_A1 | Up | 0.0160807582 |
| GSE19899_A2 | Up | 0.9560650433 |
| PubMed_21979375_A1 | Down | -0.1840061402 |
| PubMed_21979375_A2 | Up | 1.1153159982 |
| GSE35957 | Down | -0.1433642586 |
| GSE36640 | Up | 0.0849329850 |
| GSE54402 | Up | 0.0435958616 |
| GSE9593 | Up | 0.3147809328 |
| GSE43922 | Up | 0.1347763055 |
| GSE24585 | Down | -0.0053233426 |
| GSE37065 | Down | -0.1442389268 |
| GSE28863_A1 | Down | -0.1544400615 |
| GSE28863_A2 | Down | -0.2355738522 |
| GSE28863_A3 | Up | 0.2897805643 |
| GSE28863_A4 | Up | 0.1936326780 |
| GSE48662 | Up | 0.4904850006 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
