HCSGD entry for SNX29
1. General information
| Official gene symbol | SNX29 |
|---|---|
| Entrez ID | 92017 |
| Gene full name | sorting nexin 29 |
| Other gene symbols | A-388D4.1 RUNDC2A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003777 | Microtubule motor activity | IEA | molecular_function |
| GO:0005871 | Kinesin complex | IEA | cellular_component |
| GO:0007018 | Microtubule-based movement | IEA | biological_process |
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0035091 | Phosphatidylinositol binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3039937882 | 0.9277924015 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0978754699 |
| GSE13712_SHEAR | Up | 0.1727226410 |
| GSE13712_STATIC | Down | -0.0298170522 |
| GSE19018 | Up | 0.0281687640 |
| GSE19899_A1 | Up | 0.1850406382 |
| GSE19899_A2 | Up | 0.1155781799 |
| PubMed_21979375_A1 | Up | 0.0446883214 |
| PubMed_21979375_A2 | Down | -0.1331505636 |
| GSE35957 | Down | -0.0268894304 |
| GSE36640 | Down | -0.1732736664 |
| GSE54402 | Up | 0.1275001800 |
| GSE9593 | Down | -0.2177291310 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.4345626302 |
| GSE28863_A2 | Up | 0.4590054730 |
| GSE28863_A3 | Up | 0.2054746980 |
| GSE28863_A4 | Down | -0.0432359394 |
| GSE48662 | Up | 0.1379028109 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017400 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT047758 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
