HCSGD entry for CHD1L
1. General information
| Official gene symbol | CHD1L |
|---|---|
| Entrez ID | 9557 |
| Gene full name | chromodomain helicase DNA binding protein 1-like |
| Other gene symbols | ALC1 CHDL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IDA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0004003 | ATP-dependent DNA helicase activity | TAS | molecular_function |
| GO:0004386 | Helicase activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006200 | ATP catabolic process | IMP | biological_process |
| GO:0006281 | DNA repair | TAS | biological_process |
| GO:0006338 | Chromatin remodeling | IDA | biological_process |
| GO:0006974 | Cellular response to DNA damage stimulus | IDA | biological_process |
| GO:0016887 | ATPase activity | IMP | molecular_function |
| GO:0032508 | DNA duplex unwinding | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9507980586 | 0.0619928422 | 0.9999902473 | 0.4695788201 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2569108549 |
| GSE13712_SHEAR | Up | 0.0628992018 |
| GSE13712_STATIC | Up | 0.1939990790 |
| GSE19018 | Down | -0.0743604252 |
| GSE19899_A1 | Down | -0.2692736394 |
| GSE19899_A2 | Down | -0.2336878746 |
| PubMed_21979375_A1 | Down | -0.3495745617 |
| PubMed_21979375_A2 | Down | -0.3333015262 |
| GSE35957 | Down | -0.2969307379 |
| GSE36640 | Down | -0.6159060233 |
| GSE54402 | Up | 0.0757526669 |
| GSE9593 | Up | 0.2134521863 |
| GSE43922 | Down | -0.0786325429 |
| GSE24585 | Down | -0.1880946688 |
| GSE37065 | Up | 0.0481192695 |
| GSE28863_A1 | Up | 0.1165707067 |
| GSE28863_A2 | Up | 0.5962383468 |
| GSE28863_A3 | Down | -0.6612189286 |
| GSE28863_A4 | Down | -0.2753236293 |
| GSE48662 | Down | -0.1518335425 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-320a | MIMAT0000510 | MIRT044802 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
