HCSGD entry for FRAT1
1. General information
| Official gene symbol | FRAT1 |
|---|---|
| Entrez ID | 10023 |
| Gene full name | frequently rearranged in advanced T-cell lymphomas |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0016055 | Wnt signaling pathway | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7332240150 | 0.1054725922 | 0.9999902473 | 0.6220354246 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0556402804 |
| GSE13712_SHEAR | Down | -1.5036631762 |
| GSE13712_STATIC | Down | -1.3845374245 |
| GSE19018 | Up | 0.2326308650 |
| GSE19899_A1 | Down | -0.1495823765 |
| GSE19899_A2 | Down | -0.7228066986 |
| PubMed_21979375_A1 | Down | -0.4052299627 |
| PubMed_21979375_A2 | Down | -0.0849003291 |
| GSE35957 | Up | 0.1581912650 |
| GSE36640 | Up | 0.1904184563 |
| GSE54402 | Up | 0.0181796898 |
| GSE9593 | Up | 0.1264942896 |
| GSE43922 | Up | 0.0251426321 |
| GSE24585 | Up | 0.0565384154 |
| GSE37065 | Up | 0.0563108376 |
| GSE28863_A1 | Up | 0.2736135128 |
| GSE28863_A2 | Down | -0.0606642768 |
| GSE28863_A3 | Up | 0.1752875168 |
| GSE28863_A4 | Up | 0.0592086573 |
| GSE48662 | Up | 0.0060684946 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-877-3p | MIMAT0004950 | MIRT036909 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037726 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
