HCSGD entry for STAG1
1. General information
| Official gene symbol | STAG1 |
|---|---|
| Entrez ID | 10274 |
| Gene full name | stromal antigen 1 |
| Other gene symbols | SA1 SCC3A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0000775 | Chromosome, centromeric region | TAS | cellular_component |
| GO:0000785 | Chromatin | IDA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005694 | Chromosome | TAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0007059 | Chromosome segregation | IEA | biological_process |
| GO:0007067 | Mitosis | IEA | biological_process |
| GO:0030054 | Cell junction | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9515300786 | 0.0139123817 | 0.9999902473 | 0.2324936829 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1017491442 |
| GSE13712_SHEAR | Up | 0.1520459923 |
| GSE13712_STATIC | Down | -0.2555345956 |
| GSE19018 | Down | -0.5187108150 |
| GSE19899_A1 | Down | -0.3378198574 |
| GSE19899_A2 | Down | -0.4098222181 |
| PubMed_21979375_A1 | Up | 0.2371543270 |
| PubMed_21979375_A2 | Down | -0.3023183671 |
| GSE35957 | Up | 0.1434848030 |
| GSE36640 | Down | -0.4169314765 |
| GSE54402 | Down | -0.1839014233 |
| GSE9593 | Up | 0.0565397931 |
| GSE43922 | Up | 0.0216621246 |
| GSE24585 | Down | -0.6228876086 |
| GSE37065 | Up | 0.0248064352 |
| GSE28863_A1 | Up | 0.2246054504 |
| GSE28863_A2 | Up | 0.2968352492 |
| GSE28863_A3 | Down | -0.9755945597 |
| GSE28863_A4 | Down | -0.4077357855 |
| GSE48662 | Down | -0.6349780363 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT022070 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029901 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045515 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049410 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050227 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
