HCSGD entry for RBM14
1. General information
| Official gene symbol | RBM14 |
|---|---|
| Entrez ID | 10432 |
| Gene full name | RNA binding motif protein 14 |
| Other gene symbols | COAA PSP2 SIP SYTIP1 TMEM137 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0001104 | RNA polymerase II transcription cofactor activity | NAS | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | NAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005667 | Transcription factor complex | IPI | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006260 | DNA replication | NAS | biological_process |
| GO:0006281 | DNA repair | NAS | biological_process |
| GO:0006310 | DNA recombination | NAS | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | NAS | biological_process |
| GO:0009725 | Response to hormone | TAS | biological_process |
| GO:0016575 | Histone deacetylation | IPI | biological_process |
| GO:0016592 | Mediator complex | NAS | cellular_component |
| GO:0030374 | Ligand-dependent nuclear receptor transcription coactivator activity | IPI | molecular_function |
| GO:0030520 | Intracellular estrogen receptor signaling pathway | NAS | biological_process |
| GO:0030529 | Ribonucleoprotein complex | TAS | cellular_component |
| GO:0030674 | Protein binding, bridging | NAS | molecular_function |
| GO:0042921 | Glucocorticoid receptor signaling pathway | NAS | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8767028190 | 0.0265640211 | 0.9999902473 | 0.3120562834 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0326262052 |
| GSE13712_SHEAR | Up | 0.1032384428 |
| GSE13712_STATIC | Down | -0.1859379862 |
| GSE19018 | Down | -0.4356147004 |
| GSE19899_A1 | Down | -0.3170434403 |
| GSE19899_A2 | Down | -0.3497938179 |
| PubMed_21979375_A1 | Down | -0.7913320504 |
| PubMed_21979375_A2 | Down | -0.4948087118 |
| GSE35957 | Down | -0.2313781197 |
| GSE36640 | Down | -0.8498812375 |
| GSE54402 | Down | -0.0944896756 |
| GSE9593 | Down | -0.3373194541 |
| GSE43922 | Down | -0.1740092823 |
| GSE24585 | Down | -0.3058202361 |
| GSE37065 | Up | 0.0808546605 |
| GSE28863_A1 | Up | 0.9485856087 |
| GSE28863_A2 | Up | 0.1777309017 |
| GSE28863_A3 | Down | -0.3412625907 |
| GSE28863_A4 | Up | 0.0951262784 |
| GSE48662 | Down | -0.2310434114 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040655 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30b-5p | MIMAT0000420 | MIRT046161 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047979 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051521 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
