HCSGD entry for EMG1
1. General information
| Official gene symbol | EMG1 |
|---|---|
| Entrez ID | 10436 |
| Gene full name | EMG1 N1-specific pseudouridine methyltransferase |
| Other gene symbols | C2F Grcc2f NEP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001510 | RNA methylation | IDA | biological_process |
| GO:0003723 | RNA binding | ISS | molecular_function |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0005730 | Nucleolus | ISS | cellular_component |
| GO:0005737 | Cytoplasm | ISS | cellular_component |
| GO:0006364 | RRNA processing | ISS | biological_process |
| GO:0019843 | RRNA binding | IEA | molecular_function |
| GO:0031167 | RRNA methylation | IDA | biological_process |
| GO:0042274 | Ribosomal small subunit biogenesis | ISS | biological_process |
| GO:0070037 | RRNA (pseudouridine) methyltransferase activity | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3026415600 | 0.0637100148 | 0.9999902473 | 0.4758768445 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6632218041 |
| GSE13712_SHEAR | Up | 0.3059126380 |
| GSE13712_STATIC | Up | 0.2847775594 |
| GSE19018 | Down | -0.5032812453 |
| GSE19899_A1 | Down | -0.1509123139 |
| GSE19899_A2 | Down | -0.2701101115 |
| PubMed_21979375_A1 | Up | 0.3727785991 |
| PubMed_21979375_A2 | Down | -0.2650094069 |
| GSE35957 | Down | -0.5880843290 |
| GSE36640 | Down | -1.0692543327 |
| GSE54402 | Up | 0.4692569928 |
| GSE9593 | Down | -0.4953335103 |
| GSE43922 | Up | 0.1386113964 |
| GSE24585 | Down | -0.8711707195 |
| GSE37065 | Down | -0.0561449824 |
| GSE28863_A1 | Up | 0.1736537482 |
| GSE28863_A2 | Up | 0.0000958038 |
| GSE28863_A3 | Up | 0.1299951713 |
| GSE28863_A4 | Up | 0.0202095742 |
| GSE48662 | Down | -0.3749115699 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
