HCSGD entry for HOXB13
1. General information
| Official gene symbol | HOXB13 |
|---|---|
| Entrez ID | 10481 |
| Gene full name | homeobox B13 |
| Other gene symbols | PSGD |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001525 | Angiogenesis | IEP | biological_process |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005667 | Transcription factor complex | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0008544 | Epidermis development | TAS | biological_process |
| GO:0009611 | Response to wounding | TAS | biological_process |
| GO:0033574 | Response to testosterone | IEA | biological_process |
| GO:0040008 | Regulation of growth | IEA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0060527 | Prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis | IEA | biological_process |
| GO:0060743 | Epithelial cell maturation involved in prostate gland development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5376502337 | 0.7844749288 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0358084559 |
| GSE13712_SHEAR | Down | -0.0347593783 |
| GSE13712_STATIC | Down | -0.0775601664 |
| GSE19018 | Down | -0.1445828766 |
| GSE19899_A1 | Up | 0.0519125078 |
| GSE19899_A2 | Up | 0.0703850715 |
| PubMed_21979375_A1 | Down | -0.1303458561 |
| PubMed_21979375_A2 | Down | -0.0493086408 |
| GSE35957 | Up | 0.1712543240 |
| GSE36640 | Down | -0.0179569559 |
| GSE54402 | Up | 0.0212006980 |
| GSE9593 | Up | 0.1224869993 |
| GSE43922 | Up | 0.0842094892 |
| GSE24585 | Up | 0.6136755445 |
| GSE37065 | Down | -0.1404353674 |
| GSE28863_A1 | Down | -0.0957432741 |
| GSE28863_A2 | Down | -0.0599898735 |
| GSE28863_A3 | Up | 0.3567871725 |
| GSE28863_A4 | Up | 0.0594267549 |
| GSE48662 | Down | -0.0993439960 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019730 | Microarray | Functional MTI (Weak) | 20215506 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
