HCSGD entry for APOBEC2
1. General information
| Official gene symbol | APOBEC2 |
|---|---|
| Entrez ID | 10930 |
| Gene full name | apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2 |
| Other gene symbols | ARCD1 ARP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | TAS | molecular_function |
| GO:0004126 | Cytidine deaminase activity | TAS | molecular_function |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0009972 | Cytidine deamination | TAS | biological_process |
| GO:0016556 | MRNA modification | IEA | biological_process |
| GO:0080111 | DNA demethylation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4964029710 | 0.5961159150 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1258913064 |
| GSE13712_SHEAR | Up | 0.0119043379 |
| GSE13712_STATIC | Down | -0.0945855420 |
| GSE19018 | Up | 0.1081873977 |
| GSE19899_A1 | Up | 0.0287200105 |
| GSE19899_A2 | Down | -0.0552711284 |
| PubMed_21979375_A1 | Down | -0.2568408501 |
| PubMed_21979375_A2 | Down | -0.1929322279 |
| GSE35957 | Up | 0.1103625638 |
| GSE36640 | Up | 0.0659509182 |
| GSE54402 | Up | 0.0777411394 |
| GSE9593 | Up | 0.0852480778 |
| GSE43922 | Up | 0.1207730928 |
| GSE24585 | Up | 0.2187603441 |
| GSE37065 | Down | -0.1162979796 |
| GSE28863_A1 | Down | -0.4425128837 |
| GSE28863_A2 | Down | -0.0860050069 |
| GSE28863_A3 | Up | 0.2452876155 |
| GSE28863_A4 | Up | 0.2758960614 |
| GSE48662 | Up | 0.0247766271 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
