HCSGD entry for SLC27A4
1. General information
| Official gene symbol | SLC27A4 |
|---|---|
| Entrez ID | 10999 |
| Gene full name | solute carrier family 27 (fatty acid transporter), member 4 |
| Other gene symbols | ACSVL4 FATP4 IPS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0001579 | Medium-chain fatty acid transport | IEA | biological_process |
| GO:0001676 | Long-chain fatty acid metabolic process | IDA | biological_process |
| GO:0004467 | Long-chain fatty acid-CoA ligase activity | IDA | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | IDA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005902 | Microvillus | IEA | cellular_component |
| GO:0006629 | Lipid metabolic process | TAS | biological_process |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0007584 | Response to nutrient | IEA | biological_process |
| GO:0015245 | Fatty acid transporter activity | TAS | molecular_function |
| GO:0015908 | Fatty acid transport | TAS | biological_process |
| GO:0015909 | Long-chain fatty acid transport | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031526 | Brush border membrane | IEA | cellular_component |
| GO:0031957 | Very long-chain fatty acid-CoA ligase activity | IEA | molecular_function |
| GO:0042760 | Very long-chain fatty acid catabolic process | IEA | biological_process |
| GO:0043588 | Skin development | IEA | biological_process |
| GO:0044539 | Long-chain fatty acid import | IDA | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0524449413 | 0.8107107937 | 0.5008720247 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1592727514 |
| GSE13712_SHEAR | Up | 0.0399599679 |
| GSE13712_STATIC | Up | 0.3401183267 |
| GSE19018 | Down | -0.1159176361 |
| GSE19899_A1 | Up | 0.0562050527 |
| GSE19899_A2 | Up | 0.2364977430 |
| PubMed_21979375_A1 | Up | 0.0569620365 |
| PubMed_21979375_A2 | Up | 2.3531887292 |
| GSE35957 | Up | 0.2988307307 |
| GSE36640 | Up | 0.2106807315 |
| GSE54402 | Up | 0.0978061167 |
| GSE9593 | Down | -0.1974618513 |
| GSE43922 | Up | 0.4370015227 |
| GSE24585 | Down | -0.4562686099 |
| GSE37065 | Down | -0.1771969189 |
| GSE28863_A1 | Down | -0.0011762508 |
| GSE28863_A2 | Up | 0.3626405963 |
| GSE28863_A3 | Down | -0.1328657286 |
| GSE28863_A4 | Down | -0.0663103558 |
| GSE48662 | Up | 0.4735582768 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023551 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031405 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-23a-3p | MIMAT0000078 | MIRT050385 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
