HCSGD entry for SLC52A3
1. General information
| Official gene symbol | SLC52A3 |
|---|---|
| Entrez ID | 113278 |
| Gene full name | solute carrier family 52, riboflavin transporter, member 3 |
| Other gene symbols | BVVLS BVVLS1 C20orf54 RFT2 RFVT3 bA371L19.1 hRFT2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | IDA | cellular_component |
| GO:0006766 | Vitamin metabolic process | TAS | biological_process |
| GO:0006767 | Water-soluble vitamin metabolic process | TAS | biological_process |
| GO:0006771 | Riboflavin metabolic process | TAS | biological_process |
| GO:0007605 | Sensory perception of sound | IMP | biological_process |
| GO:0032217 | Riboflavin transporter activity | IDA | molecular_function |
| GO:0032218 | Riboflavin transport | IDA | biological_process |
| GO:0034605 | Cellular response to heat | IEA | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5032719616 | 0.8107976939 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0048258647 |
| GSE13712_SHEAR | Up | 0.0278497628 |
| GSE13712_STATIC | Up | 0.0270198793 |
| GSE19018 | Up | 0.1373605242 |
| GSE19899_A1 | Down | -0.0639828382 |
| GSE19899_A2 | Up | 0.1084961377 |
| PubMed_21979375_A1 | Down | -0.0707422475 |
| PubMed_21979375_A2 | Down | -0.1426651220 |
| GSE35957 | Up | 0.0532395589 |
| GSE36640 | Up | 0.0661868056 |
| GSE54402 | Down | -0.0834692968 |
| GSE9593 | Down | -0.0445669586 |
| GSE43922 | Up | 0.1614531973 |
| GSE24585 | Up | 0.1548528381 |
| GSE37065 | Up | 0.1108625258 |
| GSE28863_A1 | Down | -0.2093581425 |
| GSE28863_A2 | Down | -0.1860441848 |
| GSE28863_A3 | Up | 0.5713492903 |
| GSE28863_A4 | Up | 0.0522064171 |
| GSE48662 | Down | -0.0343518904 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044271 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
