HCSGD entry for DTX2
1. General information
| Official gene symbol | DTX2 |
|---|---|
| Entrez ID | 113878 |
| Gene full name | deltex homolog 2 (Drosophila) |
| Other gene symbols | RNF58 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007219 | Notch signaling pathway | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016567 | Protein ubiquitination | IEA | biological_process |
| GO:0016874 | Ligase activity | IEA | molecular_function |
| GO:0031965 | Nuclear membrane | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1491777174 | 0.9655772729 | 0.7731642449 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0125581780 |
| GSE13712_SHEAR | Up | 0.1321343034 |
| GSE13712_STATIC | Up | 0.0633884487 |
| GSE19018 | Up | 0.0749745427 |
| GSE19899_A1 | Up | 0.0516859918 |
| GSE19899_A2 | Up | 0.3631527832 |
| PubMed_21979375_A1 | Down | -0.1877437152 |
| PubMed_21979375_A2 | Up | 0.2889770994 |
| GSE35957 | Down | -0.0203624096 |
| GSE36640 | Up | 0.2824354748 |
| GSE54402 | Up | 0.1083541623 |
| GSE9593 | Up | 0.1331212572 |
| GSE43922 | Up | 0.5810501675 |
| GSE24585 | Up | 0.0864975806 |
| GSE37065 | Up | 0.0692030620 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.0949750484 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050508 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
