HCSGD entry for VASN
1. General information
| Official gene symbol | VASN |
|---|---|
| Entrez ID | 114990 |
| Gene full name | vasorin |
| Other gene symbols | SLITL2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0005765 | Lysosomal membrane | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0071456 | Cellular response to hypoxia | IEA | biological_process |
| GO:0071461 | Cellular response to redox state | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1381530071 | 0.3466675658 | 0.7486259617 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0083406821 |
| GSE13712_SHEAR | Down | -0.1792685033 |
| GSE13712_STATIC | Down | -0.1311355237 |
| GSE19018 | Down | -0.2933461763 |
| GSE19899_A1 | Down | -0.2199821485 |
| GSE19899_A2 | Down | -0.0564191386 |
| PubMed_21979375_A1 | Down | -0.2824766641 |
| PubMed_21979375_A2 | Up | 0.1399715864 |
| GSE35957 | Down | -0.2574764389 |
| GSE36640 | Up | 0.7299892947 |
| GSE54402 | Down | -0.2393100636 |
| GSE9593 | Down | -0.0047131181 |
| GSE43922 | Up | 0.0076913493 |
| GSE24585 | Up | 0.4153418831 |
| GSE37065 | Up | 0.0789505061 |
| GSE28863_A1 | Up | 1.1851800125 |
| GSE28863_A2 | Up | 0.7065144777 |
| GSE28863_A3 | Up | 0.2617369352 |
| GSE28863_A4 | Down | -0.1938009064 |
| GSE48662 | Down | -0.0196315003 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018355 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-375 | MIMAT0000728 | MIRT019949 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022816 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031814 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
