HCSGD entry for AGAP4

1. General information

Official gene symbolAGAP4
Entrez ID119016
Gene full nameArfGAP with GTPase domain, ankyrin repeat and PH domain 4
Other gene symbolsCTGLF1 MRIP2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0008060ARF GTPase activator activityIEAmolecular_function
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0032312Regulation of ARF GTPase activityIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.47924474750.28092411000.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1641872378
GSE13712_SHEARUp0.4508998099
GSE13712_STATICDown-0.0322577638
GSE19018Up0.2220310994
GSE19899_A1Up0.0510925045
GSE19899_A2Down-0.2259201469
PubMed_21979375_A1Down-0.3393558499
PubMed_21979375_A2Down-0.2875007820
GSE35957Down-0.3558154759
GSE36640Down-0.3798195807
GSE54402Up0.2839757542
GSE9593Down-0.0958561841
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1Up0.3506238074
GSE28863_A2Down-0.4117890871
GSE28863_A3Down-0.3342242323
GSE28863_A4Up0.2588899936
GSE48662--

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-1296-5pMIMAT0005794MIRT036118CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.