HCSGD entry for TARSL2
1. General information
| Official gene symbol | TARSL2 |
|---|---|
| Entrez ID | 123283 |
| Gene full name | threonyl-tRNA synthetase-like 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0004829 | Threonine-tRNA ligase activity | IEA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006435 | Threonyl-tRNA aminoacylation | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016876 | Ligase activity, forming aminoacyl-tRNA and related compounds | IEA | molecular_function |
| GO:0043039 | TRNA aminoacylation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1717473690 | 0.7134605980 | 0.8141753013 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2556842304 |
| GSE13712_SHEAR | Up | 0.0374580608 |
| GSE13712_STATIC | Down | -0.0632562825 |
| GSE19018 | Up | 0.2220274302 |
| GSE19899_A1 | Down | -0.2641563889 |
| GSE19899_A2 | Down | -0.1701306956 |
| PubMed_21979375_A1 | Down | -0.0894074550 |
| PubMed_21979375_A2 | Down | -0.1973145043 |
| GSE35957 | Up | 0.1967985978 |
| GSE36640 | Up | 0.5067576163 |
| GSE54402 | Down | -0.0607557021 |
| GSE9593 | Up | 0.0401942068 |
| GSE43922 | Down | -0.1614579314 |
| GSE24585 | Up | 0.1224220251 |
| GSE37065 | Up | 0.1341058156 |
| GSE28863_A1 | Up | 0.6528169300 |
| GSE28863_A2 | Up | 0.5093771868 |
| GSE28863_A3 | Down | -0.2684274134 |
| GSE28863_A4 | Up | 0.1975510580 |
| GSE48662 | Up | 0.2161104941 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT045233 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
