HCSGD entry for NUDT16

1. General information

Official gene symbolNUDT16
Entrez ID131870
Gene full namenudix (nucleoside diphosphate linked moiety X)-type motif 16
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000287Magnesium ion bindingIDAmolecular_function
GO:0003729MRNA bindingIDAmolecular_function
GO:0005525GTP bindingIDAmolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005654NucleoplasmTAScellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0006382Adenosine to inosine editingIMPbiological_process
GO:0006402MRNA catabolic processIDAbiological_process
GO:0008235Metalloexopeptidase activityIDAmolecular_function
GO:0008284Positive regulation of cell proliferationIMPbiological_process
GO:0016077SnoRNA catabolic processIDAbiological_process
GO:0016311DephosphorylationIDAbiological_process
GO:0030145Manganese ion bindingIDAmolecular_function
GO:0030515SnoRNA bindingIDAmolecular_function
GO:0034656Nucleobase-containing small molecule catabolic processTASbiological_process
GO:0035863DITP catabolic processISSbiological_process
GO:0035870DITP diphosphatase activityISSmolecular_function
GO:0042803Protein homodimerization activityIDAmolecular_function
GO:0044281Small molecule metabolic processTASbiological_process
GO:0046709IDP catabolic processIDAbiological_process
GO:0050072M7G(5')pppN diphosphatase activityIDAmolecular_function
GO:0050897Cobalt ion bindingIDAmolecular_function
GO:0055086Nucleobase-containing small molecule metabolic processTASbiological_process
GO:0090068Positive regulation of cell cycle processIMPbiological_process
GO:0090450Inosine-diphosphatase activityEXPmolecular_function
GO:0097383DIDP diphosphatase activityEXPmolecular_function
GO:0098519Nucleotide phosphatase activity, acting on free nucleotidesIDAmolecular_function
GO:1901639XDP catabolic processIDAbiological_process
GO:1901640XTP bindingIDAmolecular_function
GO:1901641ITP bindingIDAmolecular_function
GO:2000233Negative regulation of rRNA processingISSbiological_process
GO:2000781Positive regulation of double-strand break repairIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.17453314840.48995680260.81989773341.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2415307877
GSE13712_SHEARDown-0.1841219989
GSE13712_STATICDown-0.7003537074
GSE19018Down-0.0122640783
GSE19899_A1Down-0.1123137845
GSE19899_A2Up0.1535454952
PubMed_21979375_A1Down-1.4783371199
PubMed_21979375_A2Down-0.1704405153
GSE35957Down-0.0707918187
GSE36640Up0.9886341176
GSE54402Up0.1396676963
GSE9593Up0.4306821074
GSE43922Down-0.1757636911
GSE24585Up0.0602641750
GSE37065Down-0.0780645776
GSE28863_A1Up0.3556189560
GSE28863_A2Up0.6188717572
GSE28863_A3Up0.2874629934
GSE28863_A4Up0.1885236715
GSE48662Down-0.0628672408

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-615-3pMIMAT0003283MIRT040206CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.