HCSGD entry for SCLT1
1. General information
| Official gene symbol | SCLT1 |
|---|---|
| Entrez ID | 132320 |
| Gene full name | sodium channel and clathrin linker 1 |
| Other gene symbols | CAP-1A CAP1A hCAP-1A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0005814 | Centriole | IDA | cellular_component |
| GO:0008022 | Protein C-terminus binding | IEA | molecular_function |
| GO:0017080 | Sodium channel regulator activity | IEA | molecular_function |
| GO:0030276 | Clathrin binding | IEA | molecular_function |
| GO:0042384 | Cilium assembly | IMP | biological_process |
| GO:0045111 | Intermediate filament cytoskeleton | IDA | cellular_component |
| GO:0045162 | Clustering of voltage-gated sodium channels | IEA | biological_process |
| GO:0071439 | Clathrin complex | IEA | cellular_component |
| GO:0097539 | Ciliary transition fiber | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9958516508 | 0.0030092132 | 0.9999902473 | 0.1100076389 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6119225692 |
| GSE13712_SHEAR | Down | -0.1057660435 |
| GSE13712_STATIC | Up | 0.0743425359 |
| GSE19018 | Up | 0.0171864837 |
| GSE19899_A1 | Down | -0.2397655130 |
| GSE19899_A2 | Down | -0.8617886230 |
| PubMed_21979375_A1 | Down | -0.5761453829 |
| PubMed_21979375_A2 | Down | -1.3437955942 |
| GSE35957 | Down | -0.5032074494 |
| GSE36640 | Down | -2.1838311464 |
| GSE54402 | Down | -0.8680823448 |
| GSE9593 | Down | -0.5416687399 |
| GSE43922 | Down | -0.6268548685 |
| GSE24585 | Up | 0.2702775317 |
| GSE37065 | Up | 0.2130831836 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.5905465377 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
