HCSGD entry for ZNF280B
1. General information
| Official gene symbol | ZNF280B |
|---|---|
| Entrez ID | 140883 |
| Gene full name | zinc finger protein 280B |
| Other gene symbols | 5'OY11.1 D87009.C22.3 SUHW2 ZNF279 ZNF632 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9829638084 | 0.0390605030 | 0.9999902473 | 0.3728142132 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0167490479 |
| GSE13712_SHEAR | Down | -0.1408340136 |
| GSE13712_STATIC | Up | 0.0922361402 |
| GSE19018 | Down | -0.2051950275 |
| GSE19899_A1 | Down | -0.1172800331 |
| GSE19899_A2 | Down | -0.3135623690 |
| PubMed_21979375_A1 | Down | -0.0436477759 |
| PubMed_21979375_A2 | Down | -0.4209757706 |
| GSE35957 | Down | -0.7067166821 |
| GSE36640 | Down | -0.3090010619 |
| GSE54402 | Down | -0.1297398901 |
| GSE9593 | Up | 0.0777269733 |
| GSE43922 | Down | -0.3915285646 |
| GSE24585 | Up | 0.0905223764 |
| GSE37065 | Up | 0.1850854737 |
| GSE28863_A1 | Down | -0.6004766648 |
| GSE28863_A2 | Down | -0.3410613449 |
| GSE28863_A3 | Down | -0.1654459875 |
| GSE28863_A4 | Up | 0.0097984652 |
| GSE48662 | Down | -0.1658778834 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7d-5p | MIMAT0000065 | MIRT032184 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037330 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7f-5p | MIMAT0000067 | MIRT051397 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
