HCSGD entry for RBFOX3
1. General information
| Official gene symbol | RBFOX3 |
|---|---|
| Entrez ID | 146713 |
| Gene full name | RNA binding protein, fox-1 homolog (C. elegans) 3 |
| Other gene symbols | FOX-3 FOX3 HRNBP3 NEUN |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0000381 | Regulation of alternative mRNA splicing, via spliceosome | IEA | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0008380 | RNA splicing | IEA | biological_process |
| GO:0043204 | Perikaryon | IEA | cellular_component |
| GO:0043484 | Regulation of RNA splicing | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6326839558 | 0.9281532199 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0026717309 |
| GSE13712_SHEAR | Down | -0.0209190445 |
| GSE13712_STATIC | Down | -0.1144359788 |
| GSE19018 | Up | 0.0959247398 |
| GSE19899_A1 | Up | 0.0160393330 |
| GSE19899_A2 | Up | 0.1414513335 |
| PubMed_21979375_A1 | Up | 0.0889311838 |
| PubMed_21979375_A2 | Up | 0.2426586393 |
| GSE35957 | Up | 0.1014301717 |
| GSE36640 | Up | 0.1105843816 |
| GSE54402 | Up | 0.0271740049 |
| GSE9593 | Up | 0.0241835012 |
| GSE43922 | Up | 0.0565385917 |
| GSE24585 | Down | -0.0306501340 |
| GSE37065 | Down | -0.0200381265 |
| GSE28863_A1 | Down | -0.0633916410 |
| GSE28863_A2 | Down | -0.1111728795 |
| GSE28863_A3 | Up | 0.3195099562 |
| GSE28863_A4 | Up | 0.0809827873 |
| GSE48662 | Up | 0.0071498052 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
