HCSGD entry for TMEM56

1. General information

Official gene symbolTMEM56
Entrez ID148534
Gene full nametransmembrane protein 56
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0008150Biological_processNDbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.99310283040.00687767180.99999024730.1653088342

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0016279586
GSE13712_SHEARDown-0.0915405254
GSE13712_STATICUp0.0666909110
GSE19018Down-1.2291068884
GSE19899_A1Down-0.2553701901
GSE19899_A2Down-1.8018911028
PubMed_21979375_A1Down-0.4513135106
PubMed_21979375_A2Down-0.5738014013
GSE35957Down-0.9029553256
GSE36640Up0.5561634206
GSE54402Down-1.4315589674
GSE9593Down-0.8210456505
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.0775455545

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-21-5pMIMAT0000076MIRT030900MicroarrayFunctional MTI (Weak)18591254
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.