HCSGD entry for LSM14B
1. General information
| Official gene symbol | LSM14B |
|---|---|
| Entrez ID | 149986 |
| Gene full name | LSM14B, SCD6 homolog B (S. cerevisiae) |
| Other gene symbols | C20orf40 FAM61B LSM13 RAP55B bA11M20.3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006417 | Regulation of translation | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0030529 | Ribonucleoprotein complex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5602630827 | 0.8014671745 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0922470507 |
| GSE13712_SHEAR | Up | 0.0034501819 |
| GSE13712_STATIC | Up | 0.0280347770 |
| GSE19018 | Down | -0.0857543821 |
| GSE19899_A1 | Down | -0.0591776388 |
| GSE19899_A2 | Up | 0.0030110928 |
| PubMed_21979375_A1 | Down | -0.0412624035 |
| PubMed_21979375_A2 | Down | -0.4343055484 |
| GSE35957 | Up | 0.0738270146 |
| GSE36640 | Down | -0.2345461717 |
| GSE54402 | Up | 0.0764270394 |
| GSE9593 | Up | 0.0946550020 |
| GSE43922 | Down | -0.0389299124 |
| GSE24585 | Up | 0.2738214247 |
| GSE37065 | Up | 0.0184609889 |
| GSE28863_A1 | Up | 0.2389717317 |
| GSE28863_A2 | Up | 0.0554936185 |
| GSE28863_A3 | Up | 0.2422603664 |
| GSE28863_A4 | Up | 0.1315367911 |
| GSE48662 | Up | 0.3667149584 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024697 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026201 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-193a-3p | MIMAT0000459 | MIRT044887 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046094 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
