HCSGD entry for SAMD3
1. General information
| Official gene symbol | SAMD3 |
|---|---|
| Entrez ID | 154075 |
| Gene full name | sterile alpha motif domain containing 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5485406747 | 0.2628179097 | 0.9999902473 | 0.9843551508 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1661969504 |
| GSE13712_SHEAR | Down | -0.0172620692 |
| GSE13712_STATIC | Down | -0.0709806577 |
| GSE19018 | Down | -0.1801448332 |
| GSE19899_A1 | Up | 0.0508253960 |
| GSE19899_A2 | Up | 0.3667555299 |
| PubMed_21979375_A1 | Up | 0.1739947145 |
| PubMed_21979375_A2 | Up | 0.2021670083 |
| GSE35957 | Up | 0.3086838873 |
| GSE36640 | Down | -0.3385633152 |
| GSE54402 | Up | 0.4913615907 |
| GSE9593 | Up | 0.0521285998 |
| GSE43922 | Up | 0.0249586181 |
| GSE24585 | Down | -0.0319326392 |
| GSE37065 | Down | -0.0418186040 |
| GSE28863_A1 | Down | -0.4004335703 |
| GSE28863_A2 | Down | -0.1012675783 |
| GSE28863_A3 | Up | 0.0603733344 |
| GSE28863_A4 | Down | -0.2354628435 |
| GSE48662 | Down | -0.1261406368 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT026352 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
