HCSGD entry for RBM33
1. General information
| Official gene symbol | RBM33 |
|---|---|
| Entrez ID | 155435 |
| Gene full name | RNA binding motif protein 33 |
| Other gene symbols | PRR8 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2059857870 | 0.9673081000 | 0.8748994513 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0565777335 |
| GSE13712_SHEAR | Up | 0.2880304955 |
| GSE13712_STATIC | Up | 0.1386812105 |
| GSE19018 | Up | 0.1253466608 |
| GSE19899_A1 | Up | 0.1226523368 |
| GSE19899_A2 | Up | 0.2202498312 |
| PubMed_21979375_A1 | Up | 0.1343812139 |
| PubMed_21979375_A2 | Up | 0.2240906291 |
| GSE35957 | Down | -0.3133672263 |
| GSE36640 | Down | -0.1427813304 |
| GSE54402 | Up | 0.2800456151 |
| GSE9593 | Down | -0.1020844416 |
| GSE43922 | Up | 0.0796187472 |
| GSE24585 | Up | 0.1101667465 |
| GSE37065 | Up | 0.0720649877 |
| GSE28863_A1 | Up | 0.2135524482 |
| GSE28863_A2 | Up | 0.3867147023 |
| GSE28863_A3 | Up | 0.1719892006 |
| GSE28863_A4 | Down | -0.1815914849 |
| GSE48662 | Up | 0.1008940532 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-3p | MIMAT0004672 | MIRT038573 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-3p | MIMAT0004493 | MIRT038975 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT046841 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT047359 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
