HCSGD entry for STOML3
1. General information
| Official gene symbol | STOML3 |
|---|---|
| Entrez ID | 161003 |
| Gene full name | stomatin (EPB72)-like 3 |
| Other gene symbols | Epb7.2l SRO |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0005929 | Cilium | IEA | cellular_component |
| GO:0007165 | Signal transduction | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0045121 | Membrane raft | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7192660765 | 0.6611378519 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2695905153 |
| GSE13712_SHEAR | Down | -0.1158308377 |
| GSE13712_STATIC | Down | -0.1133342543 |
| GSE19018 | Down | -0.1992674178 |
| GSE19899_A1 | Down | -0.1023150119 |
| GSE19899_A2 | Up | 0.1688063004 |
| PubMed_21979375_A1 | Up | 0.0314448143 |
| PubMed_21979375_A2 | Up | 0.1551849305 |
| GSE35957 | Up | 0.2443541538 |
| GSE36640 | Down | -0.0175394477 |
| GSE54402 | Up | 0.0063858090 |
| GSE9593 | Up | 0.0459125654 |
| GSE43922 | Up | 0.0133074504 |
| GSE24585 | Up | 0.0126301884 |
| GSE37065 | Up | 0.0262507163 |
| GSE28863_A1 | Up | 0.1332356147 |
| GSE28863_A2 | Down | -0.0134290746 |
| GSE28863_A3 | Up | 0.1896412910 |
| GSE28863_A4 | Up | 0.0715008567 |
| GSE48662 | Up | 0.1282100606 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 15236317 | Eighty percent of familial melanomas exhibited loss of heterozygosity (LOH) within the region, with a smallest region of overlapping deletions (SRO) of 9 Mb between D1S207 and D1S435 |
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