HCSGD entry for ZNF780B


1. General information

Official gene symbolZNF780B
Entrez ID163131
Gene full namezinc finger protein 780B
Other gene symbolsZNF779
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003676Nucleic acid bindingIEAmolecular_function
GO:0003677DNA bindingIEAmolecular_function
GO:0005622IntracellularIEAcellular_component
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.38978575660.36524258960.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0169388134
GSE13712_SHEARUp0.1186437940
GSE13712_STATICUp0.1034130530
GSE19018Down-0.0818499867
GSE19899_A1Down-0.0544115235
GSE19899_A2Down-0.0884186561
PubMed_21979375_A1Down-0.1053673325
PubMed_21979375_A2Up0.1523209028
GSE35957Up0.0202710909
GSE36640Down-0.1869534069
GSE54402Up0.0759682670
GSE9593Down-0.0636181008
GSE43922Down-0.1178184324
GSE24585Up0.0252769283
GSE37065Up0.0010770226
GSE28863_A1Up0.7242782921
GSE28863_A2Up0.0443333689
GSE28863_A3Down-0.9024886938
GSE28863_A4Up0.2172927450
GSE48662Up0.2013298540

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-30c-5pMIMAT0000244MIRT047971CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.