HCSGD entry for HFM1
1. General information
| Official gene symbol | HFM1 |
|---|---|
| Entrez ID | 164045 |
| Gene full name | HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) |
| Other gene symbols | MER3 RP11-539G11.1 SEC63D1 Si-11 Si-11-6 helicase |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000712 | Resolution of meiotic recombination intermediates | IEA | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0008026 | ATP-dependent helicase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8061673113 | 0.7383897952 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1110732377 |
| GSE13712_SHEAR | Down | -0.0176226283 |
| GSE13712_STATIC | Up | 0.0505681566 |
| GSE19018 | Up | 0.0772440186 |
| GSE19899_A1 | Up | 0.0554943028 |
| GSE19899_A2 | Down | -0.0902782319 |
| PubMed_21979375_A1 | Down | -0.0136722579 |
| PubMed_21979375_A2 | Down | -0.1197205118 |
| GSE35957 | Up | 0.0933753737 |
| GSE36640 | Down | -0.0930272129 |
| GSE54402 | Up | 0.0032362041 |
| GSE9593 | Up | 0.0171707746 |
| GSE43922 | Down | -0.0370927063 |
| GSE24585 | Down | -0.1699496767 |
| GSE37065 | Down | -0.0690589432 |
| GSE28863_A1 | Up | 0.3279433812 |
| GSE28863_A2 | Up | 0.2463250346 |
| GSE28863_A3 | Up | 0.0735371398 |
| GSE28863_A4 | Down | -0.0702351255 |
| GSE48662 | Down | -0.0671890193 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017476 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022487 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
