HCSGD entry for LONRF2
1. General information
| Official gene symbol | LONRF2 |
|---|---|
| Entrez ID | 164832 |
| Gene full name | LON peptidase N-terminal domain and ring finger 2 |
| Other gene symbols | RNF192 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004176 | ATP-dependent peptidase activity | IEA | molecular_function |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3640436724 | 0.7044453668 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0215877219 |
| GSE13712_SHEAR | Down | -0.0384209323 |
| GSE13712_STATIC | Up | 0.0120925551 |
| GSE19018 | Down | -0.3514568228 |
| GSE19899_A1 | Up | 0.3043558494 |
| GSE19899_A2 | Down | -0.0130561955 |
| PubMed_21979375_A1 | Up | 0.0266207740 |
| PubMed_21979375_A2 | Up | 0.1503218053 |
| GSE35957 | Up | 0.0818877288 |
| GSE36640 | Up | 0.1979516811 |
| GSE54402 | Up | 0.3591715316 |
| GSE9593 | Down | -0.1552676082 |
| GSE43922 | Up | 0.1211352222 |
| GSE24585 | Down | -0.5915952284 |
| GSE37065 | Down | -0.0709397916 |
| GSE28863_A1 | Up | 0.0003545146 |
| GSE28863_A2 | Up | 0.3183583273 |
| GSE28863_A3 | Up | 0.2265312225 |
| GSE28863_A4 | Down | -0.0491198201 |
| GSE48662 | Up | 0.0674406184 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017317 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030776 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040118 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042342 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051147 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
