HCSGD entry for XIRP1
1. General information
| Official gene symbol | XIRP1 |
|---|---|
| Entrez ID | 165904 |
| Gene full name | xin actin-binding repeat containing 1 |
| Other gene symbols | CMYA1 Xin |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005916 | Fascia adherens | IEA | cellular_component |
| GO:0008285 | Negative regulation of cell proliferation | IEA | biological_process |
| GO:0042391 | Regulation of membrane potential | IEA | biological_process |
| GO:0045214 | Sarcomere organization | IEA | biological_process |
| GO:0055013 | Cardiac muscle cell development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5549720983 | 0.5557094449 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3117637795 |
| GSE13712_SHEAR | Up | 0.3603928150 |
| GSE13712_STATIC | Down | -0.0564495302 |
| GSE19018 | Down | -0.0982935369 |
| GSE19899_A1 | Down | 0.0000000000 |
| GSE19899_A2 | Down | -0.1566831731 |
| PubMed_21979375_A1 | Up | 0.4991080041 |
| PubMed_21979375_A2 | Down | -0.0446696818 |
| GSE35957 | Up | 0.6303949635 |
| GSE36640 | Down | -0.0032446144 |
| GSE54402 | Up | 0.2887638193 |
| GSE9593 | Down | -0.4956465103 |
| GSE43922 | Up | 0.0263097044 |
| GSE24585 | Up | 0.0841732237 |
| GSE37065 | Down | -0.0273895265 |
| GSE28863_A1 | Down | -0.0781534469 |
| GSE28863_A2 | Down | -0.0819804244 |
| GSE28863_A3 | Up | 0.0833716493 |
| GSE28863_A4 | Up | 0.0340786204 |
| GSE48662 | Up | 0.1374079878 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017984 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
