HCSGD entry for TRIM65
1. General information
| Official gene symbol | TRIM65 |
|---|---|
| Entrez ID | 201292 |
| Gene full name | tripartite motif containing 65 |
| Other gene symbols | 4732463G12Rik |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9618774477 | 0.2709219710 | 0.9999902473 | 0.9955238308 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1090257577 |
| GSE13712_SHEAR | Up | 0.1286022282 |
| GSE13712_STATIC | Up | 0.1235616844 |
| GSE19018 | Down | -0.1390180905 |
| GSE19899_A1 | Down | -0.0867791567 |
| GSE19899_A2 | Down | -0.0248972441 |
| PubMed_21979375_A1 | Down | -0.2155732725 |
| PubMed_21979375_A2 | Down | -0.4600143611 |
| GSE35957 | Down | -0.0923514221 |
| GSE36640 | Down | -0.1544492252 |
| GSE54402 | Up | 0.0012678890 |
| GSE9593 | Down | -0.0893119069 |
| GSE43922 | Up | 0.0461901285 |
| GSE24585 | Down | -0.1088425631 |
| GSE37065 | Down | -0.1178457713 |
| GSE28863_A1 | Up | 0.0889486546 |
| GSE28863_A2 | Down | -0.1724223404 |
| GSE28863_A3 | Up | 0.0806757964 |
| GSE28863_A4 | Down | -0.0834927651 |
| GSE48662 | Down | -0.0175479284 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022681 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-122-5p | MIMAT0000421 | MIRT023281 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029564 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-484 | MIMAT0002174 | MIRT042378 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042948 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043464 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048856 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
