HCSGD entry for CCNY
1. General information
| Official gene symbol | CCNY |
|---|---|
| Entrez ID | 219771 |
| Gene full name | cyclin Y |
| Other gene symbols | C10orf9 CBCP1 CCNX CFP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000086 | G2/M transition of mitotic cell cycle | IDA | biological_process |
| GO:0000308 | Cytoplasmic cyclin-dependent protein kinase holoenzyme complex | IDA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0016055 | Wnt signaling pathway | IEA | biological_process |
| GO:0016538 | Cyclin-dependent protein serine/threonine kinase regulator activity | IDA | molecular_function |
| GO:0019901 | Protein kinase binding | IEA | molecular_function |
| GO:0045737 | Positive regulation of cyclin-dependent protein kinase activity | IDA | biological_process |
| GO:0051301 | Cell division | IEA | biological_process |
| GO:0060828 | Regulation of canonical Wnt signaling pathway | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9886459139 | 0.0460586110 | 0.9999902473 | 0.4029317608 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.7187720823 |
| GSE13712_SHEAR | Down | -0.1783687775 |
| GSE13712_STATIC | Down | -0.0373669397 |
| GSE19018 | Down | -0.0105768950 |
| GSE19899_A1 | Down | -0.5415539016 |
| GSE19899_A2 | Down | -0.2149711420 |
| PubMed_21979375_A1 | Down | -0.3804725990 |
| PubMed_21979375_A2 | Down | -0.4146241151 |
| GSE35957 | Up | 0.0597931585 |
| GSE36640 | Down | -0.3685932117 |
| GSE54402 | Down | -0.1308373704 |
| GSE9593 | Up | 0.0832832330 |
| GSE43922 | Down | -0.3447714179 |
| GSE24585 | Down | -0.0910965250 |
| GSE37065 | Down | -0.1673642557 |
| GSE28863_A1 | Up | 0.0048325060 |
| GSE28863_A2 | Down | -0.1259531539 |
| GSE28863_A3 | Down | -0.0798772733 |
| GSE28863_A4 | Up | 0.0695999321 |
| GSE48662 | Up | 0.0560076866 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024653 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026358 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032307 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037619 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-3p | MIMAT0004509 | MIRT038847 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041426 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
