HCSGD entry for OPN5
1. General information
| Official gene symbol | OPN5 |
|---|---|
| Entrez ID | 221391 |
| Gene full name | opsin 5 |
| Other gene symbols | GPR136 PGR12 TMEM13 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004930 | G-protein coupled receptor activity | IEA | molecular_function |
| GO:0007601 | Visual perception | IEA | biological_process |
| GO:0007602 | Phototransduction | IEA | biological_process |
| GO:0009881 | Photoreceptor activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0018298 | Protein-chromophore linkage | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2512013753 | 0.9175927434 | 0.9411916584 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0441165057 |
| GSE13712_SHEAR | Up | 0.0921316164 |
| GSE13712_STATIC | Up | 0.2223506929 |
| GSE19018 | Up | 0.0411783542 |
| GSE19899_A1 | Up | 0.0746436546 |
| GSE19899_A2 | Up | 0.1607488576 |
| PubMed_21979375_A1 | Up | 0.0712909169 |
| PubMed_21979375_A2 | Down | -0.0843004482 |
| GSE35957 | Down | -0.0399894439 |
| GSE36640 | Up | 0.0209290881 |
| GSE54402 | Down | -0.0378297990 |
| GSE9593 | Up | 0.0102509605 |
| GSE43922 | Up | 0.0760306679 |
| GSE24585 | Up | 0.2682075532 |
| GSE37065 | Down | -0.0510216178 |
| GSE28863_A1 | Down | -0.1648975271 |
| GSE28863_A2 | Up | 0.2176944400 |
| GSE28863_A3 | Up | 0.3331755521 |
| GSE28863_A4 | Up | 0.3314610334 |
| GSE48662 | Down | -0.0410945938 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
