HCSGD entry for ZSCAN23
1. General information
| Official gene symbol | ZSCAN23 |
|---|---|
| Entrez ID | 222696 |
| Gene full name | zinc finger and SCAN domain containing 23 |
| Other gene symbols | ZNF390 ZNF453 dJ29K1.3 dJ29K1.3.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6628047035 | 0.3949950534 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1454274902 |
| GSE13712_SHEAR | Up | 0.0098261586 |
| GSE13712_STATIC | Down | -0.0685463612 |
| GSE19018 | Up | 0.1006104643 |
| GSE19899_A1 | Up | 0.2080670111 |
| GSE19899_A2 | Down | -0.0435470787 |
| PubMed_21979375_A1 | Down | -0.7453668975 |
| PubMed_21979375_A2 | Up | 0.0672637955 |
| GSE35957 | Up | 0.0860345871 |
| GSE36640 | Down | -0.1506508425 |
| GSE54402 | Down | -0.4580923682 |
| GSE9593 | Up | 0.1251092310 |
| GSE43922 | Down | -0.2256719300 |
| GSE24585 | Up | 0.1649261008 |
| GSE37065 | Down | -0.0887189325 |
| GSE28863_A1 | Up | 0.3624781599 |
| GSE28863_A2 | Down | -0.0011888632 |
| GSE28863_A3 | Down | -0.2921699269 |
| GSE28863_A4 | Up | 0.0399201648 |
| GSE48662 | Down | -0.0679650667 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017469 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
