HCSGD entry for PPP6R1
1. General information
| Official gene symbol | PPP6R1 |
|---|---|
| Entrez ID | 22870 |
| Gene full name | protein phosphatase 6, regulatory subunit 1 |
| Other gene symbols | KIAA1115 PP6R1 SAP190 SAPS1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0019903 | Protein phosphatase binding | IPI | molecular_function |
| GO:0043666 | Regulation of phosphoprotein phosphatase activity | IDA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0070398959 | 0.9772559629 | 0.2190783943 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4771798157 |
| GSE13712_SHEAR | Down | -0.1266318701 |
| GSE13712_STATIC | Up | 0.1128651399 |
| GSE19018 | Up | 0.2544079478 |
| GSE19899_A1 | Up | 0.1578773102 |
| GSE19899_A2 | Up | 0.7496247802 |
| PubMed_21979375_A1 | Up | 2.2688100562 |
| PubMed_21979375_A2 | Up | 1.8224994637 |
| GSE35957 | Down | -0.0374322453 |
| GSE36640 | Up | 0.2743523028 |
| GSE54402 | Up | 0.8216791539 |
| GSE9593 | Up | 0.0756205568 |
| GSE43922 | Up | 0.5052004170 |
| GSE24585 | Down | -0.3111700688 |
| GSE37065 | Down | -0.1812876184 |
| GSE28863_A1 | Up | 0.2975664543 |
| GSE28863_A2 | Up | 0.3656272334 |
| GSE28863_A3 | Up | 0.1948791258 |
| GSE28863_A4 | Up | 0.0256566413 |
| GSE48662 | Up | 0.0014193807 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1296-5p | MIMAT0005794 | MIRT036111 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1229-3p | MIMAT0005584 | MIRT036308 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
