HCSGD entry for SAMD4A
1. General information
| Official gene symbol | SAMD4A |
|---|---|
| Entrez ID | 23034 |
| Gene full name | sterile alpha motif domain containing 4A |
| Other gene symbols | SAMD4 SMAUG SMAUG1 SMG SMGA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0017148 | Negative regulation of translation | IDA | biological_process |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030371 | Translation repressor activity | IDA | molecular_function |
| GO:0030425 | Dendrite | IEA | cellular_component |
| GO:0045202 | Synapse | IEA | cellular_component |
| GO:0045727 | Positive regulation of translation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2855987690 | 0.1509239201 | 0.9850810666 | 0.7507972973 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2803102040 |
| GSE13712_SHEAR | Up | 0.8468292657 |
| GSE13712_STATIC | Up | 0.5408230774 |
| GSE19018 | Up | 0.0597461946 |
| GSE19899_A1 | Down | -0.5552608888 |
| GSE19899_A2 | Up | 0.0495532461 |
| PubMed_21979375_A1 | Down | -0.1714020531 |
| PubMed_21979375_A2 | Up | 0.0993669719 |
| GSE35957 | Up | 0.5116552948 |
| GSE36640 | Up | 0.6469832040 |
| GSE54402 | Down | -0.3497681856 |
| GSE9593 | Up | 0.2573837389 |
| GSE43922 | Down | -0.7192242110 |
| GSE24585 | Down | -0.4048321323 |
| GSE37065 | Down | -0.2499498618 |
| GSE28863_A1 | Up | 0.0425353521 |
| GSE28863_A2 | Up | 0.1803722127 |
| GSE28863_A3 | Up | 0.0059540684 |
| GSE28863_A4 | Down | -0.2373449448 |
| GSE48662 | Up | 0.2150888134 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019866 | Microarray | Functional MTI (Weak) | 20215506 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
