HCSGD entry for PRRC2C
1. General information
| Official gene symbol | PRRC2C |
|---|---|
| Entrez ID | 23215 |
| Gene full name | proline-rich coiled-coil 2C |
| Other gene symbols | BAT2-iso BAT2D1 BAT2L2 XTP2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008022 | Protein C-terminus binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0291294442 | 0.7334727366 | 0.3965754259 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1467265558 |
| GSE13712_SHEAR | Up | 0.0916444743 |
| GSE13712_STATIC | Down | -0.1145234790 |
| GSE19018 | Down | -0.1719217883 |
| GSE19899_A1 | Up | 0.3174203109 |
| GSE19899_A2 | Up | 0.2406720422 |
| PubMed_21979375_A1 | Up | 0.3565923661 |
| PubMed_21979375_A2 | Up | 0.5096295010 |
| GSE35957 | Down | -0.0599934137 |
| GSE36640 | Down | -0.3058010809 |
| GSE54402 | Up | 0.2885232649 |
| GSE9593 | Up | 0.0248752151 |
| GSE43922 | Down | -0.0212707785 |
| GSE24585 | Down | -0.1342123285 |
| GSE37065 | Up | 0.2338758030 |
| GSE28863_A1 | Up | 1.2572861130 |
| GSE28863_A2 | Up | 1.5614913336 |
| GSE28863_A3 | Up | 0.3909822841 |
| GSE28863_A4 | Down | -0.1855990341 |
| GSE48662 | Down | -0.4713392159 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027663 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031781 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037060 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-342-5p | MIMAT0004694 | MIRT038222 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042975 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044602 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045460 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT046993 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047500 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047747 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048425 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050592 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-19a-3p | MIMAT0000073 | MIRT050643 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
