HCSGD entry for TMEM245
1. General information
| Official gene symbol | TMEM245 |
|---|---|
| Entrez ID | 23731 |
| Gene full name | transmembrane protein 245 |
| Other gene symbols | C9orf5 CG-2 CG2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | NAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1986049352 | 0.0298389879 | 0.8609345356 | 0.3264305902 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0451805599 |
| GSE13712_SHEAR | Down | -0.0529872531 |
| GSE13712_STATIC | Up | 0.0607646499 |
| GSE19018 | Up | 0.4695281066 |
| GSE19899_A1 | Up | 0.1124824060 |
| GSE19899_A2 | Up | 0.2278924745 |
| PubMed_21979375_A1 | Down | -0.5065432982 |
| PubMed_21979375_A2 | Up | 0.4171073423 |
| GSE35957 | Up | 0.0720776464 |
| GSE36640 | Up | 0.6025832930 |
| GSE54402 | Down | -0.5186233271 |
| GSE9593 | Up | 0.6173835357 |
| GSE43922 | Up | 0.0296278301 |
| GSE24585 | Up | 0.3980885343 |
| GSE37065 | Up | 0.3614686708 |
| GSE28863_A1 | Down | -1.2231953645 |
| GSE28863_A2 | Down | -1.5411015859 |
| GSE28863_A3 | Down | -1.0633044236 |
| GSE28863_A4 | Up | 0.0322379314 |
| GSE48662 | Down | -0.3039554969 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-374b-5p | MIMAT0004955 | MIRT016078 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-340-5p | MIMAT0004692 | MIRT019650 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT020473 | Microarray | Functional MTI (Weak) | 17242205 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT021185 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT024168 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030795 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031582 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046663 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047061 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
