HCSGD entry for TFIP11


1. General information

Official gene symbolTFIP11
Entrez ID24144
Gene full nametuftelin interacting protein 11
Other gene symbolsNTR1 Spp382 TIP39 bK445C9.6 hNtr1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000398MRNA splicing, via spliceosomeICbiological_process
GO:0003676Nucleic acid bindingIEAmolecular_function
GO:0003677DNA bindingIEAmolecular_function
GO:0005578Proteinaceous extracellular matrixIEAcellular_component
GO:0005681Spliceosomal complexIDAcellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0006396RNA processingICbiological_process
GO:0016607Nuclear speckIDAcellular_component
GO:0031214Biomineral tissue developmentIEAbiological_process
GO:0071013Catalytic step 2 spliceosomeIDAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.11282107820.77414233500.69220596741.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.3752280941
GSE13712_SHEARUp0.1502746893
GSE13712_STATICUp0.1495955791
GSE19018Down-0.2104896977
GSE19899_A1Up0.1866861647
GSE19899_A2Up0.4331279492
PubMed_21979375_A1Up0.6765453651
PubMed_21979375_A2Up0.7453859845
GSE35957Down-0.1858600705
GSE36640Down-0.3920130509
GSE54402Up0.3903363946
GSE9593Up0.0339432821
GSE43922Up0.3199406361
GSE24585Up0.2603314575
GSE37065Up0.0901605619
GSE28863_A1Down-0.0921538472
GSE28863_A2Up0.0120108390
GSE28863_A3Down-0.8925564096
GSE28863_A4Down-0.0190048989
GSE48662Down-0.0575405792

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.