HCSGD entry for SPDYA
1. General information
| Official gene symbol | SPDYA |
|---|---|
| Entrez ID | 245711 |
| Gene full name | speedy/RINGO cell cycle regulator family member A |
| Other gene symbols | RINGO3 RINGOA SPDY1 SPY1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000082 | G1/S transition of mitotic cell cycle | IDA | biological_process |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006974 | Cellular response to DNA damage stimulus | IDA | biological_process |
| GO:0007140 | Male meiosis | IEA ISS | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0008284 | Positive regulation of cell proliferation | IDA | biological_process |
| GO:0019901 | Protein kinase binding | IEA IPI | molecular_function |
| GO:0045737 | Positive regulation of cyclin-dependent protein kinase activity | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3128798640 | 0.8924684852 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0646889511 |
| GSE13712_SHEAR | Down | -0.0769066818 |
| GSE13712_STATIC | Up | 0.1207439063 |
| GSE19018 | Down | -0.0872482636 |
| GSE19899_A1 | Up | 0.0986204100 |
| GSE19899_A2 | Up | 0.1117368837 |
| PubMed_21979375_A1 | Up | 0.7699724089 |
| PubMed_21979375_A2 | Up | 0.2034378484 |
| GSE35957 | Up | 0.0337628015 |
| GSE36640 | Up | 0.0738509682 |
| GSE54402 | Down | -0.1607269814 |
| GSE9593 | Up | 0.0916668859 |
| GSE43922 | Up | 0.0191952488 |
| GSE24585 | Up | 0.4121576010 |
| GSE37065 | Up | 0.0967207303 |
| GSE28863_A1 | Up | 0.0599844296 |
| GSE28863_A2 | Up | 0.3049621656 |
| GSE28863_A3 | Down | -0.1153466015 |
| GSE28863_A4 | Down | -0.1552207796 |
| GSE48662 | Down | -0.0364571878 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018986 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
