HCSGD entry for RNF169

1. General information

Official gene symbolRNF169
Entrez ID254225
Gene full namering finger protein 169
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005634NucleusIDAcellular_component
GO:0005654NucleoplasmIDAcellular_component
GO:0006974Cellular response to DNA damage stimulusIDA IMPbiological_process
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0016567Protein ubiquitinationIEAbiological_process
GO:0016874Ligase activityIEAmolecular_function
GO:0031491Nucleosome bindingIDAmolecular_function
GO:0035861Site of double-strand breakIDAcellular_component
GO:0070530K63-linked polyubiquitin bindingIDAmolecular_function
GO:2000780Negative regulation of double-strand break repairIDA IMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.89635725090.41916328790.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954--
GSE13712_SHEAR--
GSE13712_STATIC--
GSE19018--
GSE19899_A1--
GSE19899_A2--
PubMed_21979375_A1--
PubMed_21979375_A2--
GSE35957--
GSE36640--
GSE54402--
GSE9593--
GSE43922Down-0.1466161281
GSE24585Down-0.0655521367
GSE37065Up0.0730396848
GSE28863_A1Up0.0955129055
GSE28863_A2Up0.6815967514
GSE28863_A3Down-0.7149454012
GSE28863_A4Down-0.0206945870
GSE48662Down-0.2946776004

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.