HCSGD entry for LPCAT4
1. General information
| Official gene symbol | LPCAT4 |
|---|---|
| Entrez ID | 254531 |
| Gene full name | lysophosphatidylcholine acyltransferase 4 |
| Other gene symbols | AGPAT7 AYTL3 LPAAT-eta LPEAT2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | TAS | cellular_component |
| GO:0006644 | Phospholipid metabolic process | TAS | biological_process |
| GO:0006654 | Phosphatidic acid biosynthetic process | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0019432 | Triglyceride biosynthetic process | TAS | biological_process |
| GO:0036148 | Phosphatidylglycerol acyl-chain remodeling | TAS | biological_process |
| GO:0036150 | Phosphatidylserine acyl-chain remodeling | TAS | biological_process |
| GO:0036151 | Phosphatidylcholine acyl-chain remodeling | TAS | biological_process |
| GO:0036152 | Phosphatidylethanolamine acyl-chain remodeling | TAS | biological_process |
| GO:0044255 | Cellular lipid metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046474 | Glycerophospholipid biosynthetic process | TAS | biological_process |
| GO:0047166 | 1-alkenylglycerophosphoethanolamine O-acyltransferase activity | IEA | molecular_function |
| GO:0047184 | 1-acylglycerophosphocholine O-acyltransferase activity | IEA | molecular_function |
| GO:0047192 | 1-alkylglycerophosphocholine O-acetyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2767989324 | 0.4955574104 | 0.9737536354 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1377566181 |
| GSE13712_SHEAR | Up | 0.5758089475 |
| GSE13712_STATIC | Up | 0.2935918392 |
| GSE19018 | Up | 0.1763432740 |
| GSE19899_A1 | Down | -0.0397763145 |
| GSE19899_A2 | Down | -0.0557308897 |
| PubMed_21979375_A1 | Down | -0.1438643548 |
| PubMed_21979375_A2 | Up | 0.2045316072 |
| GSE35957 | Down | -0.5197259813 |
| GSE36640 | Up | 0.1902130607 |
| GSE54402 | Down | -0.0207552711 |
| GSE9593 | Down | -0.0272526504 |
| GSE43922 | Up | 0.0473860465 |
| GSE24585 | Down | -0.3912184382 |
| GSE37065 | Down | -0.1146054766 |
| GSE28863_A1 | Down | -0.0895597723 |
| GSE28863_A2 | Up | 0.1549425838 |
| GSE28863_A3 | Up | 0.0073103220 |
| GSE28863_A4 | Up | 0.4806424820 |
| GSE48662 | Down | -0.0514104991 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
